BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E11LP1|AL426056
(348 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 394 e-110
>3x_Contig1619
Length = 7770
Score = 394 bits (189), Expect = e-110
Identities = 209/225 (92%)
Strand = Plus / Plus
Query: 1 atgttatatgagggctggtatatataaataattatatattctatttttatataataatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3095 atgttatatgagggctggtatatataaataattatatattctatttttatataataatta 3154
Query: 61 ttataaaakatattargrdrkatatacaatartatatattarnnvmcccgcaaccatgct 120
|||||||| |||||| |||||||||| ||||||||| ||||||||||||||
Sbjct: 3155 ttataaaatatattaaaaaatatatacaataatatatattaatgaccccgcaaccatgct 3214
Query: 121 atggtcgcggggatadttataaatattcatctaaaaatatdatatatataatgtaattta 180
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3215 atggtcgcggggataattataaatattcatctaaaaatataatatatataatgtaattta 3274
Query: 181 taaaataatataaataaaatavtaataaaaataaatttattatta 225
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3275 taaaataatataaataaaataataataaaaataaatttattatta 3319
Score = 161 bits (77), Expect = 1e-39
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 270 ctttaagggcaatgtattaatattatggacttctatartatgggagttggtaataatatt 329
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3362 ctttaagggcaatgtattaatattatggacttctataatatgggagttggtaataatatt 3421
Query: 330 attttaataaatatatagt 348
|||||||||||||||||||
Sbjct: 3422 attttaataaatatatagt 3440
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.720 1.36
Gapped
Lambda K H
1.45 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3566
Number of Sequences: 1807
Number of extensions: 3566
Number of successful extensions: 416
Number of sequences better than 1.0e-20: 1
length of query: 348
length of database: 10,358,551
effective HSP length: 15
effective length of query: 333
effective length of database: 10,331,446
effective search space: 3440371518
effective search space used: 3440371518
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 47 (98.5 bits)